Learning a Markov Logic network for supervised gene regulatory network inference

BMC Bioinformatics

Table 4 Prediction of regulations on the updated network

This table lists the true positive rates (TPR) obtained for the prediction of regulations in $R_{2}^{+} ∖ R_{1}^{+}$ from R₁ using asymmetric bagging with 30 samples for bagged MLNs and bagged pairwise SVMs. The TPR values were obtained using a threshold maximizing the averaged F1-measure on a validation set. Notations are given in Tables 2 and 3.

ISSN: 1471-2105