Table 7 Number of SNVs called by Atlas-SNP2 with different cutoffs of the posterior probability
From: Comparing a few SNP calling algorithms using low-coverage sequencing data
Posterior probability | SNVs | dbSNPs | Non-dbSNPs |
|---|---|---|---|
≥ 0.95 (original setting) | 448 | 321 | 127 |
≥ 0.3 | 476 | 342 | 134 |
≥ 0.1 | 539 | 393 | 146 |