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Table 4 IC-based GO semantic similarity tools and functional similarity measures (FSM) they support

From: DaGO-Fun: tool for Gene Ontology-based functional analysis using term information content measures

   GO-semantic similarity features implemented
Tool Format Family Approach FSM
G-SESAME Web Topology-based Wang et al. ABM
   Annotation-based Classical Resnik, Lin Average
    and Jiang & Conrath  
ProteInOn Web Annotation-based Classical Resnik, Lin BMA and
    and Jiang & Conrath SimGIC
    GraSM  
FuSSiMeg Web Annotation-based Classical Resnik, Lin Max
    and Jiang & Conrath  
    GraSM  
FunSimMat Web Annotation-based Classical Resnik, Lin ABM
    and Jiang & Conrath  
    SimRel (enhancement)  
SemSim R Topology-based Wang et al. Method ABM
   Annotation-based Classical Resnik, Lin Average
    and Jiang & Conrath  
    SimRel (enhancement)  
csbl.go R Annotation-based Classical Resnik, Lin SimGIC
    and Jiang & Conrath Average
    GraSM and SimRel