Table 2 The rating system
From: Seq2Ref: a web server to facilitate functional interpretation
Feature | Criterion | Points | ||
|---|---|---|---|---|
True | False | NA | ||
Reciprocal BLAST | Query-to-hit-genome1 best hit | +1 | 0 | +0.253 |
Hit-to-query-genome2 best hit | +1 | 0 | +0.253 | |
Multiple Sequence Comparison (MSC) Method4 | Accept with identity cutoff 60% | +0.5 | 0 | \ |
Accept with identity cutoff 50% | +0.5 | 0 | \ | |
Accept with identity cutoff 40% | +0.5 | 0 | \ | |
Pairwise comparison to the query4 | Identity>60% | +0.5 | 0 | \ |
Identity>50% | +0.5 | 0 | \ | |
Identity>40% | +0.5 | 0 | \ | |
others | Reference proteins | +1 | 0 | \ |