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Table 5 GO terms connected sequentially in their GO relationship graph (C: cluster number, S: subset number)

From: A method to identify differential expression profiles of time-course gene data with Fourier transformation

C

S

GO ID

Terms

S

GO ID

Terms

1

1

GO:0006334

Nucleosome assembly

2

GO:0000280

Nuclear division

GO:0031497

Chromatin assembly

GO:0000087

M phase of mitotic cell cycle

GO:0006323

DNA packaging

GO:0048285

Organelle fission

GO:0034728

Nucleosome organization

GO:0022402

Cell cycle process

GO:0006333

Chromatin assembly or disassembly

GO:0000278

Mitotic cell cycle

GO:0016043

Cellular component organization

GO:0007049

Cell cycle

GO:0051276

Chromosome organization

GO:0007067

Mitosis

GO:0006325

Chromatin organization

GO:0000279

M phase

GO:0006996

Crganelle organization

GO:0022403

Cell cycle phase

2

1

GO:0007109

Cytokinesis, completion of separation

2

GO:0071554

Cell wall organization or biogenesis

GO:0000920

Cell separation during cytokinesis

GO:0007047

Cellular cell wall organization

GO:0032506

Cytokinetic process

GO:0071555

Cell wall organization

GO:0000910

Cytokinesis

GO:0070882

Cellular cell wall organization or biogenesis

  

GO:0031505

Cungal-type cell wall organization

4

1

GO:0051716

Cellular response to stimulus

2

GO:0006302

Couble-strand break repair

GO:0050896

Response to stimulus

GO:0006281

DNA repair

GO:0033554

Cellular response to stress

GO:0000724

Couble-strand break repair via homologous recombination

GO:0006950

Response to stress

GO:0006974

Cesponse to DNA damage stimulus

GO:0034605

Cellular response to heat

3

GO:0006260

DNA replication

GO:0009408

Response to heat

GO:0006273

Cagging strand elongation

GO:0009628

Response to abiotic stimulus

GO:0006261

DNA-dependent DNA replication

GO:0009266

Response to temperature stimulus

GO:0006271

DNA strand elongation during DNA replication

  

GO:0022616

DNA strand elongation

     

GO:0006259

DNA metabolic process

  1. Cluster 1, 2 and 4 have biologically meaningful genes as shown in the table.