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Table 1 Top marginal posterior probabilities and Bayes factors for the childhood asthma application

From: A scalable, knowledge-based analysis framework for genetic association studies

SNP

Gene

Posterior estimate

Bayes factor

rs13008370

ERBB4

0.47

157

rs2156192

BCL2

0.29

72

rs11680307

ERBB4

0.19

42

rs1521658

ERBB4

0.13

26

rs10108813

OXR1

0.10

20

rs9972996

BCL2

0.09

17

rs10305724

ARNT

0.04

8

rs3793371

NAPRT1

0.03

6

rs2551402

BCL2

0.03

6

rs1954752

OXR1

0.03

6

rs3019308

OXR1

0.03

5

rs12950972

CYGB

0.03

5

rs1983298

PTPRN

0.02

4

rs6435692

ERBB4

0.02

4

rs1574311

TPM1

0.02

3

rs2687975

LIAS

0.02

3

rs3788310

TXNRD2

0.02

3

rs4647519

FANCC

0.02

3

rs1050255

TPM1

0.02

3

  1. 2,521 SNPs genotyped in a GWAS of childhood asthma were extracted from 168 genes mapped to response to oxidative stress in Gene Ontology. The top estimated marginal posterior probabilities and Bayes factors are reported.