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Figure 3 | BMC Bioinformatics

Figure 3

From: zipHMMlib: a highly optimised HMM library exploiting repetitions in the input to speed up the forward algorithm

Figure 3

Number of pattern occurrences against the number of iterations performed. The number of occurrences of the most frequent pair of symbols plotted on a log-scale against the number of iterations performed of the preprocessing procedure on an alignment of the human and chimpanzee chromosome 1 encoded using the alphabet {0,1,2} for identical sites, differing sites or missing data, respectively.

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BMC Bioinformatics

ISSN: 1471-2105

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