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Figure 8 | BMC Bioinformatics

Figure 8

From: Viral quasispecies inference from 454 pyrosequencing

Figure 8

Joining constructed sequences from disjoint blocks. (a) Here, we have the situation, where we can separate all sequenced reads into two disjoint blocks, Block 1 (positions 1 to 9) and Block 2 (positions 10 to 20) as there are no reads that span across positions 9 and 10. We then construct the haplotypes in each block independently as in (b) to obtain 3 possible haplotypes (V1, V2, V3) in Block 1 and 2 possible haplotypes (V4, V5) in Block 2. We then explore the possibilities of combinations of all 6 (3x2) possible haplotypes between the two blocks in (c).

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