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Table 6 Summary of the mean and standard deviation of the read lengths from 454 pyrosequencing of serotypes 1, 3 and 4 of the dengue virus obtained from lab cultures in Thailand

From: Viral quasispecies inference from 454 pyrosequencing

Serotype Mean SD QuasQ ShoRAH QuRe ViSpA ViSpA (Corrected) QuasiRecomb (No recomb) QuasiRecomb (With recomb)
1 224.1 52.7 7 203 1 566 2 91 90
3 223.7 51.7 33 205 2 516 4 24 23
4 209.9 61.6 68 145 2 188 3 - -
  1. The last seven columns show the number of constructed haplotypes from QuasQ, ShoRAH, QuRe, ViSpA, ViSpA (with ShoRAH corrected reads), QuasiRecomb (no recombination) and QuasiRecomb (with recombination).