BMC Bioinformatics

Table 3 Sample size calculation for transcript regulation data set under various desired minimum fold changes ( ρ ^∗ ) for r ₁ = 1 0 7 at F D R = 1 0 % when m = 1 3 2 6 7 and m _{1
=
1
3
3}

From: Sample size calculation based on exact test for assessing differential expression analysis in RNA-seq data

		NB		Poisson
ρ ^∗		n		n _w	n _s	n _lw	n _ls	n _tp	n _lr
0.10		19		15	14	21	10	10	14
0.25		35		23	23	26	19	19	21
0.50		109		62	60	62	58	56	59
0.75		558		284	281	282	280	273	281
1.25		821		316	363	366	360	371	381
1.50		240		100	102	103	99	105	105
2.00		79		30	31	32	29	32	32
2.50		44		16	16	18	15	17	16
3.00		30		10	11	12	9	11	10

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ISSN: 1471-2105

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