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Table 2 Mean number of SNPs and prognostic SNPs included in the fitted prediction models, recovery rate and means/standard deviations of the log-rank p-values from the test set for the proposed method at ρ = 0 and censoring = 30%

From: Prediction of a time-to-event trait using genome wide SNP data

n β Mean number of Mean number of Recovery rate Mean (SD) p-value
   selected SNP selected prognostic SNP   of the log-rank test
200 0.8 6.72 5.05 0.75 <0.0001 (<0.0001)
  1 6.13 5.18 0.85 <0.0001 (<0.0001)
  2 5.60 5.17 0.92 <0.0001 (<0.0001)
300 0.8 6.18 5.53 0.89 <0.0001 (<0.0001)
400 0.8 5.89 5.72 0.97 <0.0001 (<0.0001)