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Table 2 Identified gene numbers by the proposed method, EDGE and Sohn’s method for comparing gene expression profiles between the wild type and the cyclin mutant, adjusted at FDR levels of 0.01 and 0.05, respectively

From: More powerful significant testing for time course gene expression data using functional principal component analysis approaches

  FDR = 0.01 FDR = 0.05
  Genes Overlap Overlap Genes Overlap Overlap
  identified w/Orlando w/proposed identified w/Orlando w/proposed
Proposed 883 631 - 1086 735 -
EDGE 704 524 679 839 600 833
Sohn’s 522 410 516 758 557 755
  1. The numbers of genes overlapped with the list by [17] and the proposed method are also included.