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Table 1 Simulation parameters

From: Local search for the generalized tree alignment problem

Parameter Values Evaluated
Substitution Rate 1.5
Average Branch Length 0.1,0.2,0.3,∞
Max. Gap 1,2,5,10,15
Root Sequence Length 500
  1. All combinations of parameters were employed to generate the test data sets. The branch length variation equals the average branch length.
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BMC Bioinformatics

ISSN: 1471-2105

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