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Table 1 Simulation parameters

From: Local search for the generalized tree alignment problem

Parameter Values Evaluated
Substitution Rate 1.5
Average Branch Length 0.1,0.2,0.3,
Max. Gap 1,2,5,10,15
Root Sequence Length 500
  1. All combinations of parameters were employed to generate the test data sets. The branch length variation equals the average branch length.