From: A hybrid short read mapping accelerator
76 bp
100 bp
Error
2%
4%
6%
Hybrid aligner
30s
29 s
37 s
38 s
GASSST
227 s
216 s
199 s
292 s
268 s
253 s
BWA
109 s
150 s
162 s
153 s
214 s
221 s
Speedup1
7.6
7.2
6.8
7.9
7.1
Speedup2
3.6
5.0
5.6
4.1
5.7
5.9