Figure 3From: Learning a peptide-protein binding affinity predictor with kernel ridge regressionA pyMOL illustration of a binding pocket used in the binding pocket kernel. This pyMOL illustration of a binding pocket, used for the binding pocket kernel [26], shows a MHC-I molecule B*3501 complexed with a peptide (VPLRPMTY) from the NEF protein of HIV1 (PDB ID 1A1N). The MHC protein is shown in yellow, the peptide is shown in red.Back to article page