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Table 7 Comparison with other tools: plant species

From: HuntMi: an efficient and taxon-specific approach in pre-miRNA identification

Species

#Sequences

PlantMiRNAPred

HuntMi

Arabidopsis thaliana

68

80.88

91.18

Cucumis melo

120

90.00

95.00

Glycine max

302

-

88.41

Hordeum vulgare

45

55.56

35.56

Malus domestica

206

88.83

99.51

Medicago truncatula

300

-

72.67

Nicotiana tabacum

163

84.66

93.25

Oryza sativa

169

60.95

69.82

Populus trichocarpa

89

89.89

97.75

Sorghum bicolor

58

94.83

94.83

  1. Classification sensitivity of PlantMiRNAPred and HuntMi on plant miRNAs added in miRBase issues 18-19. PlantMiRNAPred failed to process some Arabidopsis thaliana miRNAs successfully. However, these sequences were treated as properly identified.