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Figure 1 | BMC Bioinformatics

Figure 1

From: An inferential framework for biological network hypothesis tests

Figure 1

One-sample tests for an Erdős-Rényi graph. P-value results from 100 independent tests of H 0 :G(25,p) = G(25,0.20) versus H 1 :G(25,p) > G(25,0.20). The y-axis is the observed resample p-value; the x-axis is the expected p-value under the null hypothesis. Panels (a) and (c), via a uniform distribution qq-plot, illustrate the Type I error rate using 2 settings for c ij . Panels (b) and (d) illustrate the performance of D under the alternate hypothesis for 2 settings of c ij ; a horizontal line corresponding to an α = 0.05 level is provided.

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