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Table 2 Valine leucine and isoleucine biosynthesis (MAP290) and D-Arginine and D - Ornithine Metabolism (MAP472) gene sets for the Normal and Type II (DM2) phenotypes

From: An inferential framework for biological network hypothesis tests

MAP 290

            

Probe

Normal

     

DM2

     

1

1.0

.

.

.

.

.

1.0

.

.

.

.

.

2

 

1.0

0.53

0.59

0.59

.

 

1.0

.

.

.

.

3

  

1.0

0.73

.

.

  

1.0

0.81

.

.

4

   

1.0

0.86

.

   

1.0

.

.

5

    

1.0

.

    

1.0

.

6

     

1.0

     

1.0

MAP 472

            

1

1.0

0.62

0.61

0.56

0.60

0.52

1.0

0.63

0.62

0.64

0.57

0.54

2

 

1.0

0.99

0.98

0.97

0.94

 

1.0

0.99

0.97

0.98

0.94

3

  

1.0

0.98

0.97

0.95

  

1.0

0.97

0.96

0.95

4

   

1.0

0.97

0.97

   

1.0

0.98

0.96

5

    

1.0

0.96

    

1.0

0.94

6

     

1.0

     

1.0

  1. The numerical values are the thresholded correlation estimates. A ‘.’ denotes the lack of an edge between two probes, ‘1.0’ is a visual placeholder. The actual probes differ between the two gene sets.