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Table 1 Valid and correct alignments with gap opening penalty 10.0 and gap extension penalty 0.5.

From: libgapmis: extending short-read alignments

Programme Valid Correct
Needle 94,552 94,516
Gapmis 100,000 99,996
  1. The valid and correct alignments of 100, 000 pairs of 100 bp-long generated sequences with gap opening penalty 10.0 and gap extension penalty 0.5.