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Table 2 Valid and correct alignments with gap opening penalty 8.0 and gap extension penalty 1.0.

From: libgapmis: extending short-read alignments

Programme Valid Correct
needle 76,512 76,501
gapmis 100,000 99,997
  1. The valid and correct alignments of 100, 000 pairs of 100 bp-long generated sequences with gap opening penalty 8.0 and gap extension penalty 1.0.