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Table 2 Members of the spectrum sets

From: A base composition analysis of natural patterns for the preprocessing of metagenome sequences

Set Seed

Available Motifs

AAATTT

12

CCCGGG

12

AATTCG

156

CCGGAT

156

  1. The numbers of available motifs belonging to each spectrum. The motifs in the spectrum set are nonpalindromic and are permutations of the set seeds. The set created from the permutation of AATTCG is called, the AATTCG- spectrum, for example.
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BMC Bioinformatics

ISSN: 1471-2105

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