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Table 4 Ranking of sets

From: A base composition analysis of natural patterns for the preprocessing of metagenome sequences

Ranking

Set Seed

Figure

1

CCGGAT

15

2

AAATTT

16

3

AATTCG

17

4

Palindromes, Length-6

19

5

CCCGGG

18

  1. Ranking of Spectrum Sets over Chromosomal Data: We note the best to worse resemblance of spectrum set trees to actual taxonomy data. For this data set, the CCGGAT- spectrum set created a tree which most closely resembled the one based on the classification in NCBI taxonomy database in Figure 14.