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Table 1 Information of the provenance graph for a genome project (already shown in de Paula [16])

From: Provenance in bioinformatics workflows

PROJECT

WORKFLOW EXECUTION

Name

Description

Funding Institutions

Partner Institutions

Coordinator

Start Date

End Date

Name of the Project

Description of the Project

List of the Project funding institutions

List of the Project partner institutions

Name of the Project coordinator

Project Start date

Project End date

Name

Description

Location

Date

Version Date

Version

Notes

Name of the Workflow Execution

Description of the Workflow Execution

Execution Location

Execution Date

Version Date

Version number

Any information about the execution of

the Workflow Execution

AGENT

ACTIVITY

Name

Institution

Position

Function

Groups

Notes

Name of the person

Affiliated Institution

Position or Function

Function in the Workflow Execution

Filtering provenance graph groups

Any information about Agent

Name

Program

Version

Command Line

Function

Start Time

End Time

Environment

Groups

Notes

Name of the Activity

Program Name

Program Version

Command Line used and parameters

Description of what is being done

Date and time the Activity began

Date and time the Activity ended

Description of computational

environment

Filtering provenance graph groups

Any information about the execution of

the Activity

COLLECTION

ENTITY

Name

Size

Description

Location

Group

Notes

Name of the Collection

Number of Entities contained in Collection

Description of the Collection content

Location of the file or database with the

Content of the Collection

Filtering provenance graph groups

Any information about the content of the Collection

Name

Description

Location

Group

Notes

Name of the Collection

Description of the Entity content

Location of the file or database with the

content of the Entity

Filtering provenance graph groups

Any information about the content of the

Entity