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Table 11 Characteristics of mined sequential patterns in GSE6377 (SWS = variable, maxTC = ∞ days, minSup p = 95% and minTSupp = 100%)

From: An efficient method for mining cross-timepoint gene regulation sequential patterns from time course gene expression datasets

 

0d

1d

2d

3d

4d

5d

6d

7d

8d

9d

≥ 10d

# of CTGR-SPs

352

419

203

203

169

169

201

189

279

354

423

# of longest CTGR-SPs

81

81

46

46

3

3

201

189

279

354

423

Maximal length of CTGR-SPs

4

4

3

3

2

2

1

1

1

1

1

# of genes in CTGR-SPs

206

212

178

178

174

174

187

183

197

209

213

# of genes in longest CTGR-SPs

14

14

11

11

2

2

11

9

15

20

21

# of gene pairs in lonest CTGR-SPs

70

70

33

33

5

5

0

0

0

0

0

-Log(p-value)†

0.37

0.37

0.44

0.44

0.44

0.44

-

-

-

-

-

  1. d: # of days of SWS; †: test longest CTGR-SPs-involved genes in inflammatory response using GO enrichment analysis; -: no p-values.