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Table 11 Characteristics of mined sequential patterns in GSE6377 (SWS = variable, maxTC = ∞ days, minSup p = 95% and minTSupp = 100%)

From: An efficient method for mining cross-timepoint gene regulation sequential patterns from time course gene expression datasets

  0d 1d 2d 3d 4d 5d 6d 7d 8d 9d ≥ 10d
# of CTGR-SPs 352 419 203 203 169 169 201 189 279 354 423
# of longest CTGR-SPs 81 81 46 46 3 3 201 189 279 354 423
Maximal length of CTGR-SPs 4 4 3 3 2 2 1 1 1 1 1
# of genes in CTGR-SPs 206 212 178 178 174 174 187 183 197 209 213
# of genes in longest CTGR-SPs 14 14 11 11 2 2 11 9 15 20 21
# of gene pairs in lonest CTGR-SPs 70 70 33 33 5 5 0 0 0 0 0
-Log(p-value) 0.37 0.37 0.44 0.44 0.44 0.44 - - - - -
  1. d: # of days of SWS; †: test longest CTGR-SPs-involved genes in inflammatory response using GO enrichment analysis; -: no p-values.