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Table 4 Example of transactional database

From: An efficient method for mining cross-timepoint gene regulation sequential patterns from time course gene expression datasets

Patient IDs

Sequences

1

<(G1+)1(G2-G3+)2(G3+)3>

2

<(G1+G4-)1(G3+)2(G2-G3+)4(G5+)5>

3

<(G8-)1(G1+G2-)2(G2-G3+)3>

4

<(G7+)1(G1+G3+G6-)2(G2-G3+)3>

  1. <>: a sequence; ()t: a transaction of time point t; G+/-: significantly up- or down-regulated gene item.
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BMC Bioinformatics

ISSN: 1471-2105

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