Skip to main content

Table 7 Example of maxTC = 1

From: An efficient method for mining cross-timepoint gene regulation sequential patterns from time course gene expression datasets

Prefixes

Projected databases

CTGR-SPs

G1+

<(G2-G3+)2'(G3+)3>

<(G1+)(G2-)>

 

<(G3+)2'(G2-G3+)4(G5+)5>

<(G1+)(G3+)>

 

<(G2-G3+)3'>

 
 

<(G2-G3+)3'>

 

G2-

<(G3+)3'>

<(G2-)(G3+)>

 

<(G5+)5'>

 
 

<(G2-G3+)3'>

 
 

<>

 

G3+

<(G3+)3'>

<(G3+)(G3+)>

 

<(G2-G3+)4(G5+)5>

 
 

<>

 
 

<(G2-G3+)3'>

 
  1. G+/-: significantly up- or down-regulated gene item; <>: a sequence; ()t: a transaction of time point t; _: indexed prefix; *: redundant patterns derived from traditional pattern-growth-based sequential pattern mining methods.
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us