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Table 9 Characteristics of mined sequential patterns in GSE6377 (maxTC = variable, minSupp = 95% and minTSupp = 100%)

From: An efficient method for mining cross-timepoint gene regulation sequential patterns from time course gene expression datasets

 

2d

3d

4d

5d

6d

7d

8d

9d

≥ 10d

# of CTGR-SPs

157

157

166

166

180

180

298

306

426

# of longest CTGR-SPs

157

157

9

9

17

17

58

58

81

Maximal length of CTGR-SPs

1

1

3

3

4

4

4

4

4

# of genes in CTGR-SPs

157

157

169

169

179

179

201

202

211

# of genes in longest CTGR-SPs

0

0

7

7

10

10

12

12

14

# of gene pairs in lonest CTGR-SPs

0

0

11

11

27

27

50

50

70

-Log(p-value)

-

-

0

0

0

0

0

0

0.34

  1. d: # of days of SWS; †: test longest CTGR-SPs-involved genes in inflammatory response using GO enrichment analysis; -: no p-values.