Protein function prediction by collective classification with explicit and implicit edges in protein-protein interaction networks

Table 4 The effect of the combination parameter λ (Dataset A: M.musculus)

parameter λ	molecular function				biological process			cellular component
parameter λ	1st	2nd	3rd	1st	2nd	3rd	4th	1st	2nd	3rd
Origin	0.282	0.124	0.099	0.389	0.233	0.127	0.087	1.632	0.449	0.237
λ=0.1	0.327	0.160	0.149	0.416	0.229	0.131	0.104	1.762	0.549	0.267
λ=0.3	0.470	0.285	0.230	0.563	0.317	0.157	0.135	2.020	0.670	0.319
λ=0.5	0.442	0.296	0.161	0.537	0.267	0.147	0.146	1.850	0.618	0.279
λ=0.7	0.404	0.253	0.183	0.493	0.285	0.168	0.109	1.654	0.540	0.245
λ=0.9	0.376	0.206	0.110	0.429	0.243	0.115	0.131	1.522	0.414	0.197

ISSN: 1471-2105