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Table 7 The effect of the number of BLAST-inferred edges k (Dataset A: M.musculus)

From: Protein function prediction by collective classification with explicit and implicit edges in protein-protein interaction networks

parameter k molecular function   biological process   cellular component
1st 2nd 3rd 1st 2nd 3rd 4th 1st 2nd 3rd
Origin 0.282 0.124 0.099 0.389 0.233 0.127 0.087 1.632 0.449 0.237
k=1 0.391 0.237 0.150 0.470 0.255 0.147 0.115 1.708 0.497 0.270
k=5 0.470 0.285 0.230 0.563 0.297 0.177 0.135 2.020 0.670 0.319
k=10 0.491 0.242 0.212 0.538 0.316 0.142 0.109 1.943 0.579 0.293
k=15 0.456 0.266 0.203 0.493 0.339 0.151 0.123 1.857 0.620 0.331