Table 4 Performance consistency with DESeq and NOISeq on the Chlamydomonas data
From: Comparative studies of differential gene calling using RNA-Seq data
| Â | Threshold valuesa | |||||
|---|---|---|---|---|---|---|
| Â | 0.001 | 0.005 | 0.01 | 0.05 | 0.1 | 0.2 |
[DESeq] | Â | Â | Â | Â | Â | Â |
  Average precision | 1.00 | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 |
    Average recall | 0.03 | 0.04 | 0.05 | 0.07 | 0.07 | 0.08 |
[NOISeq] | Â | Â | Â | Â | Â | Â |
  Average precision | 0.02 | 0.08 | 0.12 | 0.15 | 0.17 | 0.24 |
    Average recall | 1.00 | 1.00 | 1.00 | 0.96 | 0.95 | 0.94 |