Table 1 Summary of tasks for TLX evaluation of PSPACE.
From: Towards human-computer synergetic analysis of large-scale biological data
Task | Alternate | Time Allocated | Task Description |
|---|---|---|---|
Charting Protein Classes | VisIT | 10 min | Users inspect MPSS and need to determine the rough locations of protein classes at the top of CATH and SCOP hierarchies |
Charting Protein Superfamiles | VisIT | 10 min | As above, for two selected protein superfamiles: (Immunoglobins and PH-domain) |
Structure Classification | RCSB PDB | 15 min | Users are presented with two unclassified proteins and have to assign them likely classifications (PDB IDs 2cry.A, 2hvv.A) |
Function Prediction | RCSB PDB | 15 min | Users are presented with two proteins of unknown function and have to assign them likely functions (PDB IDs 3fh1.A, 3lno.A) |