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Table 9 Feature groups used in feature assessment and description

From: A study and benchmark of DNcon: a method for protein residue-residue contact prediction using deep networks

Name

Features included

seq

Residue type (hot encoded)

atch

Atchley factors

bins

The separation in sequence between the residue-residue pair (hot encoded)

globs

Contact potentials, relative position and percentage of helix, loop, beta sheet, exposed

pssm-ssa

Information from the PSSM and predicted secondary structure and solvent accessibility (hot encoded)