Table 2 a comparison of alternative splicing in SASD against several common alternative splicing data sources
From: SASD: the S ynthetic A lternative S plicing D atabase for identifying novel isoform from proteomics
| Â | ASTD[14] | ECgene[18] | PEPPI[10] | SASD | |
|---|---|---|---|---|---|
AS coverage | 9405 | 62,474 | 185,174 | 5,324,542 | 11,919,779 |
gene coverage | 16,710 | 11,242 | 37,204 | 23,516 | 56,630 |
Last Updated | 2008 | 2000 | July 2007 | Feb 2010 | May 2013 |
Curation Type | Manual | Synthetic | Synthetic | Synthetic | Synthetic |
Query by single gene | No | No | No | Yes | Yes |
Query by Pathway | No | No | No | No | Yes |
Query by Disease | No | No | No | No | Yes |
Query by Drug | No | No | No | No | Yes |
Query by Organ | No | No | No | No | Yes |
Query by custom gene set | No | No | No | No | Yes |
Query by gene sequence | No | No | No | Yes | Yes |
Gene view | No | No | No | Yes | Yes |
Transcript view | No | No | No | No | Yes |
Region view | No | No | No | Yes | Yes |
Peptide sequence | No | No | No | Yes | Yes |