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Table 1 miR-target correlations in experimentally validated and computationally predicted subsets

From: mirCoX: a database of miRNA-mRNA expression correlations derived from RNA-seq meta-analysis

Dataset

Experimentally validated?

# miR-gene pairs

ΔCorrelation

miRecord

yes

268

-0.051

miRanda (conserved)

no

194414

-0.009

miRanda(nonconserved)

no

965520

-0.016

TargetScan

no

51487

-0.015

  1. For each miR-target database, the mean miR-gene expression correlation was calculated for miR-target pairs within the database and compared to the mean correlation for all possible miR-gene pairs. The difference between the mean correlation for pairs within a database and the mean correlation for all pairs is given as ∆correlation.
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BMC Bioinformatics

ISSN: 1471-2105

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