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Figure 5 | BMC Bioinformatics

Figure 5

From: Homology modeling, molecular docking, and molecular dynamics simulations elucidated α-fetoprotein binding modes

Figure 5

Docking poses of the 13 rat AFP binders. Binders are represented by constant colored sticks and protein are represented by lines and colored according atom types. The binding pocket surface is colored by electrostatic properties. a) Most ligands bind to the pocket comprising Glu206, Glu209, Gly210, Leu213, Lys236, His260, Try306, and His310; b) one ligand binds to the pocket composed of Leu236, Gln239 Tyr306, Ile309, His310, Glu312, Asn313, Leu359, Val361, Ala465 and Ile473.

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