|
Features
|
Window size
|
CD-5p (structure-based)
|
CD-3p (structure-based)
|
|---|
| | |
Sn
|
Sp
|
Ac
|
Mc
|
Sn
|
Sp
|
Ac
|
Mc
|
|---|
|
Mono
|
8
|
62.88
|
65.59
|
64.23
|
0.28
|
62.88
|
57.30
|
60.09
|
0.20
|
| |
10
|
67.21
|
66.85
|
67.03
|
0.34
|
63.24
|
63.06
|
63.15
|
0.26
|
| |
12
|
71.53
|
69.01
|
70.27
|
0.41
|
59.28
|
67.21
|
63.24
|
0.27
|
| |
14
|
68.83
|
74.77
|
71.80
|
0.44
|
61.62
|
67.39
|
64.50
|
0.29
|
|
Dinuc
|
8
|
61.98
|
63.24
|
62.61
|
0.25
|
57.84
|
59.46
|
58.65
|
0.17
|
| |
10
|
63.60
|
63.78
|
63.69
|
0.27
|
59.64
|
58.92
|
59.28
|
0.19
|
| |
12
|
69.19
|
62.34
|
65.77
|
0.32
|
63.96
|
62.52
|
63.24
|
0.26
|
| |
14
|
68.83
|
64.68
|
66.76
|
0.34
|
65.41
|
61.08
|
63.24
|
0.27
|
|
Trinuc
|
8
|
54.77
|
63.42
|
59.10
|
0.18
|
57.84
|
55.32
|
56.58
|
0.13
|
| |
10
|
63.24
|
59.82
|
61.53
|
0.23
|
57.84
|
60.00
|
58.92
|
0.18
|
| |
12
|
63.24
|
63.60
|
63.42
|
0.27
|
60.54
|
57.12
|
58.83
|
0.18
|
| |
14
|
67.39
|
62.88
|
65.14
|
0.30
|
56.76
|
64.68
|
60.72
|
0.22
|
|
Binary
|
8
|
65.23
|
65.41
|
65.32
|
0.31
|
65.23
|
70.45
|
67.84
|
0.36
|
| |
10
|
67.57
|
67.57
|
67.57
|
0.35
|
72.07
|
62.88
|
67.48
|
0.35
|
| |
12
|
72.79
|
69.91
|
71.35
|
0.43
|
71.89
|
68.11
|
70.00
|
0.40
|
| |
14
|
77.84
|
76.22
|
77.03
|
0.54
|
70.99
|
69.73
|
70.36
|
0.41
|
- Models were developed using composition and binary pattern of different window sizes. Patterns were taken from structure of Dicer cleavage site of 5p arm (structure of CP-5p) and 3p arm (structure of CP-3p) using miRNA.str data.
