Figure 3

Evaluation of clustering on transformed scores at various NC scores with SyC cut at 1.0 versus NC scores alone. Figure enumerates and displays the comparison of gene families formed by a) Single Linkage Clustering, b) Average Linkage and c) Complete Linkage. The value in each cell represents the difference between quality scores of clusters generated by GenFamClust and quality scores of clusters generated by NC alone for corresponding cell on human mouse test dataset. Green cells represent the families where GenFamClust outperforms the NC method, dark blue cells represent the families where NC outscores GenFamClust, and blue cells represent the families where both quality scores are equal. The intensity of green and blue indicates the difference in percentage between the two approaches, where darker color shows greater difference.