Quantitative synteny scoring improves homology inference and partitioning of gene families

BMC Bioinformatics

Table 1 Absolute difference between number of gene families determined by NC and those determined by GenFamClust.

Each cell represents the absolute difference between number of extant gene families (observable at leaves) (last row) and the number of gene families determined by the corresponding gene family algorithm for the corresponding dataset with the corresponding linkage algorithm. For NC, the threshold of 0.5 was used while for GenFamClust, the elliptical curve with NC = 0.5 and SyC = 1.0 was used.

ISSN: 1471-2105