Table 2 Results with predicted haploids from Variathon.
From: Haploid to diploid alignment for variation calling assessment
haploid | tp | fp | fn | precision | recall | edit distance | runtime in minutes |
|---|---|---|---|---|---|---|---|
GBT | 66190 | 323 | 29714 | 0.995 | 0.690 | 23232 | 690 |
BoBiocomp | 86589 | 2288 | 9267 | 0.974 | 0.903 | 17422 | 380 |