ViralPhos: incorporating a recursively statistical method to predict phosphorylation sites on virus proteins

BMC Bioinformatics

Table 3 Five-fold cross validation results on pThr MDDLogo-clustered SVM models.

SVM model	Number of positive data	Number of negative data	Cost value	Gamma value	Sn	Sp	Acc	MCC
All data	54	54	2	0.125	0.70	0.70	0.70	0.40
Subgroup T1	19	19	2	0.125	0.95	0.90	0.92	0.84
Subgroup T2	19	19	2	0.03125	0.95	0.95	0.95	0.89
Subgroup T3	16	16	0.5	0.125	0.68	0.75	0.72	0.44
Combined performance					0.83	0.80	0.81	0.63

ISSN: 1471-2105