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Figure 9 | BMC Bioinformatics

Figure 9

From: Visual cavity analysis in molecular simulations

Figure 9

Extending amino acids selection. Left: We expand firstly the selection by 170 - 176&193, where we can see that the cavity appeared in the beginning and in the end of the simulation predominantly. Right: We expand selection furthermore by (170 - 176)&(193 - 199), where we notice that even more cavities appeared although still not as many in the middle of the simulation. We show a typical cavity for both of selections.

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