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Table 4 Sensitivity and PPV for different ncRNA families

From: Shape and secondary structure prediction for ncRNAs including pseudoknots based on linear SVM

    Sensitivity PPV
RNA Type Len TS* Knot-Structure IP-knot Turbo-Knot Hx-match Knot-Structure IP-knot Turbo-Knot Hx-match
HDV_ribozyme 89.70 12 82.52 50.66 36.47 23.51 80.13 59.24 39.28 39.77
Alpha_RBS 110.99 18 74.36 46.59 46.24 24.49 40.59 25.34 23.70 22.19
Tombus_3_IV 91.61 4 84.00 65.91 72.00 80.00 83.14 78.02 73.47 90.91
Tymo_tRNA-like 85.12 3 96.79 76.41 83.52 75.09 90.25 73.62 86.85 90.11
Corona_FSE 82.91 9 96.14 56.55 56.55 73.27 75.65 60.51 42.19 92.30
Prion_pknot 40.46 114 40.17 13.70 2.96 30.26 32.85 15.71 3.03 28.86
  1. Bold number and underlined number indicate the highest and the second highest sensitivity or PPV for each family. Average sequence length. * The number of test sets.