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Table 4 Performance of CoNVEX against other methods.

From: CoNVEX: copy number variation estimation in exome sequencing data using HMM

Method True positives False positives
CoNVEX 9/10 10/15850
Var Scan2 6/7 4983/15283
ExomeCopy 0/10 9/15850
CONTRA 0/10 0/15847
  1. Table shows the number of exons (numerator) that have been identified as true positives and false positives by each method. The denominator shows the total true positives (2ndcolumn) or true negatives (3rdcolumn). Total number of true negatives differ among methods due to filtering and quality control done by each of them.