Table 2 Baseline: the S-S bonds determined by MS2DB+, SVM, and CSP.
Proteins | Bonds determined by different methods | |||
|---|---|---|---|---|
| Â | Known Linkages | MS2DB+ | SVM | CSP |
ST8Sia IV | 142-292 | 142-292 | 142-292 | 142-292 |
| Â | 156-356 | 156-356 | 156-356 | 156-356 |
Beta-LG | 82-176 | 82-176 | - | - |
| Â | 122-135 | - | 122-135 | 122-135 |
| Â | Â | - | 137-176 | 137-176 |
FucT VII | 68-76 | 68-76 | 68-76 | 68-76 |
| Â | 211-214 | 211-214 | 211-214 | 211-214 |
| Â | 318-321 | 318-321 | 318-321 | 318-321 |
Î’1,4-GalT | 134-176 | 134-176 | - | 134-176 |
| Â | 247-266 | 247-266 | - | 247-266 |
| Â | Â | - | 134-247 | - |
C2GnT-I | 59-413 | 59-413 | - | - |
| Â | 372-381 | 372-381 | 372-381 | - |
| Â | 100-172 | - | 100-172 | - |
| Â | 151-199 | 151-199 | - | - |
| Â | Â | - | 199-235 | - |
| Â | Â | - | - | 151-217 |
| Â | Â | - | - | 172-199 |
| Â | Â | - | - | 59-100 |
Lysozyme | 24-145 | 24-145 | 24-145 | - |
| Â | 48-133 | 48-133 | - | - |
| Â | Â | - | - | 82-98 |
| Â | Â | - | - | 94-112 |
FT III | 81-338 | 81-338 | - | - |
| Â | 91-341 | - | - | - |
| Â | Â | - | 81-91 | 81-91 |
| Â | Â | - | 338-341 | 338-341 |