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Table 5 Known and determined S-S bonds for all molecules by combining MS2DB+, SVM, and CSP using the Shafer rule.

From: Protein disulfide topology determination through the fusion of mass spectrometric analysis and sequence-based prediction using Dempster-Shafer theory

Protein Known Bonds Bonds Found Belief
ST8Sia IV 142-292, 156-356 142-292, 156-356 0.66, 0.68
Beta-LG 82-176, 122-135 82-176, 122-135 0.49, 0.36
FucT VII 68-76, 211-214,
318-321
68-76, 211-214,
318-321
0.43, 0.26, 0.54
Β1,4-GalT 134-176, 247-266 134-176, 247-266 0.35, 0.36
C2GnT-I 59-413, 100-172, 151-199, 372-381 59-413, 100-172, 151-199, 372-381 0.07, 0.08, 0.26,0.06
Lysozyme 24-145, 48-133 24-145, 48-133, 82-98, 94-112 0.31, 0.13, 0.10, 0.10
FT III 81-338, 91-341 81-338 0.67
  1. The true bonds are shown in bold.