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Table 1 The largest trees for [Daphnia+/Mouse+/Fly-] and [Daphnia+/Mouse-/Fly+].

From: Functional inference by ProtoNet family tree: the uncharacterized proteome of Daphnia pulex

Root ID
ProRoot70
# Daphnia-Mouse proteinsa ProtoName ProRoot70 General term
4495737 1166 Olfactory receptor Receptor
4480698 141 Immunoglobulin V-set Binding-EX
4486320 42 NACHT nucleoside triphosphatase Enzyme
4486050 33 S100/CaBP, calcium binding Binding
4380861 31 Crystallin-fold Fold
4385886 31 Hyaluronic acid binding Binding-EX
4381234 29 2'-5'-oligoadenylate synthetase 1 Enzyme
4474452 27 Fibronectin type III Binding-EX
4489975 25 Proteinase inhibitor I25, cystatin Enzyme
4509859 18 Endoglin/CD105 antigen Binding-EX
Root ID
ProRoot70
# Daphnia-Fruitfly proteins a ProtoName ProRoot70 General term
4490041 57 Insect cuticle protein Structure
4493131 54 Olfactory receptor, Drosophila Receptor
4434866 52 Insect cuticle protein Structure
4476453 28 MADF domain/DNA binding Binding
4392808 26 Protein of unknown function DUF243  
4310716 23 Odorant binding protein Binding
4425478 16 Protein of unknown function DUF229  
4484179 14 Insect pheromone/Odorant binding Binding
4511439 6 Trehalose/Gustatory receptor Receptor
4351940 5 Metazoa  
  1. aThe number of proteins is the number in both organisms. EX- enriched in extracellular proteins.