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Table 2 Comparing UniProtKB direct annotation with BAR+ annotation

From: How to inherit statistically validated annotation within BAR+ protein clusters

 

CAFA/UniProtKB*

BAR+ Validated°

 

Sequences

Terms

Sequences with validated annotation

Validated Terms

Sequences with new validated annotation

Total°

34,065

10,628

34,065

13,558

3,659§

Pfam^

30,767

5,293

31,190

5,365

423§

MFO^

20,790

2,048

21,758

2,698

968§

BPO^

19,739

2,719

21,585

4,879

1,846§

CCO^

16,503

568

17,589

616

1,086§

-

-

-

3,451#

5,886#

3,451#

PDB+

2,047+

-

13,084+

-

11,935+

  1. *The CAFA/UniProt KB set (the CAFA sequences that have a UniprotKB file) comprises 41,003 sequences, 3,767 of which do not contain any GO ontology and Pfam terms. °Here the CAFA/UniProtKB subset that can be validated in BAR+ is considered (BAR+validated). The number of sequences and the number of Pfam and GO terms are listed. Sequences that receive new validated terms are also listed according to Pfam, MFO, BPO and CCO. # Sequences of the CAFA set, out of a total of 7,295 that are not present in UniProtKB and are annotated in BAR+. +Number of sequences that have and also receive in BAR+ a PDB template.