Table 1 Fifty-two herpesvirus genomes used in current Vaxign analysis.
# | Infected host | Herpesvirus strains | Genome # | No of proteins |
|---|---|---|---|---|
1 | Hartebeest | Alcelaphine herpesvirus 1 | NC_002531.1 | 71 |
2 | Anatids | Anatid herpesvirus 1 | NC_013036.1 | 77 |
3 | Anguillida | Anguillid herpesvirus 1 | NC_013668.3 | 143 |
4 | Atelinae | Ateline herpesvirus 3 | NC_001987.1 | 73 |
5 | Bovinae | Bovine herpesvirus 1 | NC_001847.1 | 70 |
6 | Bovinae | Bovine herpesvirus 4 | NC_002665.1 | 79 |
7 | Bovinae | Bovine herpesvirus 5 | NC_005261.2 | 70 |
8 | Callitrichidae | Callitrichine herpesvirus 3 | NC_004367.1 | 72 |
9 | Cavy | Caviid herpesvirus 2 | NC_011587.1 | 106 |
10 | Cercopithecinae | Cercopithecine herpesvirus 2 | NC_006560.1 | 75 |
11 | Cercopithecinae | Cercopithecine herpesvirus 9 | NC_002686.2 | 74 |
12 | Cyprinidae | Cyprinid herpesvirus 3 | NC_009127.1 | 160 |
13 | Horse | Equid herpesvirus 2 | NC_001650.1 | 79 |
14 | Horse | Equid herpesvirus 4 | NC_001844.1 | 79 |
15 | Horse | Equid herpesvirus 9 | NC_011644.1 | 80 |
16 | Cat | Felid herpesvirus 1 | NC_013590.2 | 77 |
17 | Chicken | Gallid herpesvirus 1 | NC_006623.1 | 79 |
18 | Chicken | Gallid herpesvirus 2 | NC_002229.3 | 85 |
19 | Chicken | Gallid herpesvirus 3 | NC_002577.1 | 76 |
20 | Human | Human herpesvirus 1 strain 17 | NC_001806.1 | 77 |
21 | Human | Human herpesvirus 1 strain F | GU734771.1 | 77 |
22 | Human | Human herpesvirus 1 strain H129 | GU734772.1 | 77 |
23 | Human | Human herpesvirus 2 strain HG52 | NC_001798.1 | 77 |
24 | Human | Human herpesvirus 3 | NC_001348.1 | 73 |
25 | Human | Human herpesvirus 4 | NC_009334.1 | 80 |
26 | Human | Human herpesvirus 4 type 1 | NC_007605.1 | 94 |
27 | Human | Human herpesvirus 5 | NC_006273.2 | 165 |
28 | Human | Human herpesvirus 6A | NC_001664.2 | 88 |
29 | Human | Human herpesvirus 6B | NC_000898.1 | 104 |
30 | Human | Human herpesvirus 7 | NC_001716.2 | 86 |
31 | Human | Human herpesvirus 8 | NC_009333.1 | 86 |
32 | Catfish | Ictalurid herpesvirus 1 | NC_001493.1 | 90 |
33 | Macaque monkey | Macacine herpesvirus 1 | NC_004812.1 | 75 |
34 | Macaque monkey | Macacine herpesvirus 3 | NC_006150.1 | 223 |
35 | Macaque monkey | Macacine herpesvirus 4 | NC_006146.1 | 80 |
36 | Macaque monkey | Macacine herpesvirus 5, genome | NC_003401.1 | 89 |
37 | Turkey | Meleagrid herpesvirus 1 | NC_002641.1 | 79 |
38 | Mouse | Murid herpesvirus 1 | NC_004065.1 | 161 |
39 | Mouse | Murid herpesvirus 2 | NC_002512.2 | 167 |
40 | Mouse | Murid herpesvirus 4 | NC_001826.2 | 74 |
41 | Oyster | Ostreid herpesvirus 1 | AY509253.1 | 127 |
42 | Sheep | Ovine herpesvirus 2 | NC_007646.1 | 73 |
43 | Panine | Panine herpesvirus 2 | NC_003521.1 | 165 |
44 | Mouse | Papiine herpesvirus 2 | NC_007653.1 | 75 |
45 | Psittacine birds | Psittacid herpesvirus 1 | NC_005264.1 | 77 |
46 | Ranidae | Ranid herpesvirus 1 | NC_008211.1 | 132 |
47 | Ranidae | Ranid herpesvirus 2 | NC_008210.1 | 147 |
48 | Rodent | Rodent herpesvirus Peru | NC_015049.1 | 82 |
49 | Squirrel monkey | Saimiriine herpesvirus 1 | NC_014567.1 | 70 |
50 | Squirrel monkey | Saimiriine herpesvirus 2 | NC_001350.1 | 76 |
51 | Suidae | Suid herpesvirus 1 | NC_006151.1 | 175 |
52 | Tupaiid | Tupaiid herpesvirus 1 | NC_002794.1 | 158 |