Table 2 Comparison of the correctly classified (true positive - TP) and not correct classified (false positive - FP) reads of the simulated metagenome between the classifiers, metaBEETL, CARMA3, MEGAN and Genometa.
Taxonomic Level | metaBEETL | CARMA3 | MEGAN | Genometa | ||||
|---|---|---|---|---|---|---|---|---|
| Â | TP | FP | TP | FP | TP | FP | TP | FP |
Superkingdom | 129,290 | 0 | 161,162 | 153 | 178,712 | 5 | 118,340 | 0 |
Phylum | 129,280 | 10 | 158,904 | 395 | 176,604 | 31 | 113,138 | 5,202 |
Class | 129,279 | 11 | 157,545 | 395 | 175,718 | 42 | 113,138 | 5,202 |
Order | 129,279 | 11 | 155,625 | 220 | 174,737 | 47 | 113,138 | 5,202 |
Family | 129,278 | 11 | 151,684 | 363 | 171,227 | 103 | 113,125 | 5,208 |
Genus | 129,262 | 28 | 132,251 | 513 | 151,292 | 649 | 109,884 | 8,435 |
Species | 129,242 | 48 | 51,920 | 232 | 110,728 | 1,196 | 109,444 | 8,896 |