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Table 2 Comparison of the correctly classified (true positive - TP) and not correct classified (false positive - FP) reads of the simulated metagenome between the classifiers, metaBEETL, CARMA3, MEGAN and Genometa.

From: metaBEETL: high-throughput analysis of heterogeneous microbial populations from shotgun DNA sequences

Taxonomic Level metaBEETL CARMA3 MEGAN Genometa
  TP FP TP FP TP FP TP FP
Superkingdom 129,290 0 161,162 153 178,712 5 118,340 0
Phylum 129,280 10 158,904 395 176,604 31 113,138 5,202
Class 129,279 11 157,545 395 175,718 42 113,138 5,202
Order 129,279 11 155,625 220 174,737 47 113,138 5,202
Family 129,278 11 151,684 363 171,227 103 113,125 5,208
Genus 129,262 28 132,251 513 151,292 649 109,884 8,435
Species 129,242 48 51,920 232 110,728 1,196 109,444 8,896