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Figure 6 | BMC Bioinformatics

Figure 6

From: Examples of sequence conservation analyses capture a subset of mouse long non-coding RNAs sharing homology with fish conserved genomic elements

Figure 6

Genome browser screen-shots for a predicted conserved lncRNA. A) The region conserved (113364) between mouse and zebrafish mapped on the human genome and its position relatively to the LMO3 gene. The region of conservation overlaps the exon of a lincRNA predicted by Ensembl in the human genome. B) The putative conserved lncRNA in the mouse genome. The red box from which the arrow departs is the conserved fragment 113364. Green boxes above the conserved element mark the exons of the lncRNA AK020962. The conserved element lies inside an intron of an alternative transcript of the Lmo3 gene. C) Conserved region of the element 113364 in the zebrafish genome indicated by the red box. Grey box above the element represents the region of conservation in teleost fishes. The arrow indicates the position of the element in respect to the lmo3 gene in a bigger genomic interval. D) Multiple alignment of the region of conservation of the mouse lncRNA with corresponding sequences in human, zebrafish, medaka and stickleback. Note: Arrow marks the region conserved in all species.

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